the prokaryotes_A Handbook on the Biology of Bacteria
Volume 1[color=red][/color]1. Essays in Prokaryotic Biology
1.1 How We Do, Don’t and Should Look at Bacteria and Bacteriology 3
carl r. woese
1.2 Databases 24
wolfgang ludwig, karl heinz schleifer and erko stackebrandt
1.3 Defining Taxonomic Ranks 29
erko stackebrandt
1.4 Prokaryote Characterization and Identification 58
hans g. trüper and karl-heinz schleifer
1.5 Principles of Enrichment, Isolation, Cultivation, and
Preservation of Prokaryotes 80
j鰎g overmann
1.6 Prokaryotes and Their Habitats 137
hans g. schlegel and holger w. jannasch
1.7 Morphological and Physiological Diversity 185
stephen h. zinder and martin dworkin
1.8 Cell-Cell Interactions 221
dale kaiser
1.9 Prokaryotic Genomics 246
b. w. wren
1.10 Genomics and Metabolism in Escherichia coli 261
margrethe haugge serres and monica riley
1.11 Origin of Life: RNA World versus Autocatalytic Anabolism 275
günter w鋍htersh鋟ser
1.12 Biotechnology and Applied Microbiology 284
eugene rosenberg
1.13 The Structure and Function of Microbial Communities 299
david a. stahl, meredith hullar and seana davidson
2. Symbiotic Associations
2.1 Cyanobacterial-Plant Symbioses 331
david g. adams, birgitta bergman, s. a. nierzwicki-bauer,
a. n. rai and arthur schü遧er
2.2 Symbiotic Associations between Ciliates and Prokaryotes 364
hans-dieter g鰎tz
2.3 Bacteriocyte-Associated Endosymbionts of Insects 403
paul baumann, nancy a. moran and linda baumann
2.4 Symbiotic Associations Between Termites and Prokaryotes 439
andreas brune
2.5 Marine Chemosynthetic Symbioses 473
colleen m. cavanaugh, zoe p. mckiness, irene l.g. newton and
frank j. stewart
3. Biotechnology and Applied Microbiology
3.1 Organic Acid and Solvent Production 509
palmer rogers, jiann-shin chen and mary jo zidwick
3.2 Amino Acid Production 754
hidehiko kumagai
3.3 Microbial Exopolysaccharides 764
timothy harrah, bruce panilaitis and david kaplan
3.4 Bacterial Enzymes 775
wim j. quax
3.5 Bacteria in Food and Beverage Production 795
michael p. doyle and jianghong meng
3.6 Bacterial Pharmaceutical Products 810
arnold l. demain and giancarlo lancini
3.7 Biosurfactants 832
eugene rosenberg
3.8 Bioremediation 848
ronald l. crawford
viii Contents
3.9 Biodeterioration 862
ji-dong gu and ralph mitchell
3.10 Microbial Biofilms 902
dirk de beer and paul stoodley
Index 937 Volume 2
1. Ecophysiological and Biochemical Aspects
1.1 Planktonic Versus Sessile Life of Prokaryotes 3
kevin c. marshall
1.2 Bacterial Adhesion 16
itzhak ofek, nathan sharon and soman n. abraham
1.3 The Phototrophic Way of Life 32
j鰎g overmann and ferrau garcia-pichel
1.4 The Anaerobic Way of Life 86
ruth a. schmitz, rolf daniel, uwe deppenmeier and
gerhard gottschalk
1.5 Bacterial Behavior 102
judith armitage
1.6 Prokaryotic Life Cycles 140
martin dworkin
1.7 Life at High Temperatures 167
rainer jaenicke and reinhard sterner
1.8 Life at Low Temperatures 210
siegfried scherer and klaus neuhaus
1.9 Life at High Salt Concentrations 263
aharon oren
1.10 Alkaliphilic Prokaryotes 283
terry ann krulwich
1.11 Syntrophism Among Prokaryotes 309
bernhard schink and alfons j. m. stams
1.12 Quorum Sensing 336
bonnie l. bassler and melissa b. miller
1.13 Acetogenic Prokaryotes 354
harold l. drake, kirsten küsel and carola matthies
Contents ix
1.14 Virulence Strategies of Plant Pathogenic Bacteria 421
barbara n. kunkel and zhongying chen
1.15 The Chemolithotrophic Prokaryotes 441
donovan p. kelly and ann p. wood
1.16 Oxidation of Inorganic Nitrogen Compounds as an Energy Source 457
eberhard bock and michael wagner
1.17 The H2-Metabolizing Prokaryotes 496
edward schwartz and b鋜bel friedrich
1.18 Hydrocarbon-Oxidizing Bacteria 564
eugene rosenberg
1.19 Cellulose-Decomposing Bacteria and Their Enzyme Systems 578
edward a. bayer, yuval shoham and raphael lamed
1.20 Aerobic Methylotrophic Prokaryotes 618
mary e. lidstrom
1.21 Dissimilatory Fe(III)- and Mn(IV)-Reducing Prokaryotes 635
derek lovley
1.22 Dissimilatory Sulfate- and Sulfur-Reducing Prokaryotes 659
ralf rabus, theo hansen and friedrich widdel
1.23 The Denitrifying Prokaryotes 769
james p. shapleigh
1.24 Dinitrogen-Fixing Prokaryotes 793
esperanza martinez-romero
1.25 Root and Stem Nodule Bacteria of Legumes 818
michael j. sadowsky and p. h. graham
1.26 Magnetotactic Bacteria 842
stefan spring and dennis a. bazylinski
1.27 Luminous Bacteria 863
paul v. dunlap and kumiko kita-tsukamoto
1.28 Bacterial Toxins 893
vega masignani, mariagrazia pizza and rino rappuoli
1.29 The Metabolic Pathways of Biodegradation 956
lawrence p. wackett
1.30 Haloalkaliphilic Sulfur-Oxidizing Bacteria 969
dimitry yu. sorokin, horia banciu, lesley a. robertson and
j. gijs kuenen
1.31 The Colorless Sulfur Bacteria 985
lesley a. robertson and j. gijs kuenen
x Contents
1.32 Bacterial Stress Response 1012
eliora z. ron
1.33 Anaerobic Biodegradation of Hydrocarbons Including Methane 1028
friedrich widdel, antje boetius and ralf rabus
1.34 Physiology and Biochemistry of the Methane-Producing Archaea 1050
reiner hedderich and william b. whitman
Index 1081 Volume 3
A: Archaea
1. The Archaea: A Personal Overview of the Formative Years 3
ralph s. wolfe
2. Thermoproteales 10
harald huber, robert huber and karl o. stetter
3. Sulfolobales 23
harald huber and david prangishvili
4. Desulfurococcales 52
harald huber and karl o. stetter
5. The Order Thermococcales 69
costanzo bertoldo and garabed antranikian
6. The Genus Archaeoglobus 82
patricia hartzell and david reed
7. Thermoplasmatales 101
harald huber and karl o. stetter
8. The Order Halobacteriales 113
aharon oren
9. The Methanogenic Bacteria 165
william b. whitman, timothy l. bowen and david r. boone
10. The Order Methanomicrobiales 208
jean-louis garcia, bernard ollivier and william b. whitman
11. The Order Methanobacteriales 231
adam s. bonin and david r. boone
12. The Order Methanosarcinales 244
melissa m. kendall and david r. boone
Contents xi
13. Methanococcales 257
william b. whitman and christian jeanthon
14. Nanoarchaeota 274
harald huber, michael j. hohn, reinhard rachel and
karl o. stetter
15. Phylogenetic and Ecological Perspectives on Uncultured
Crenarchaeota and Korarchaeota 281
scott c. dawson, edward f. delong and norman r. pace
B: Bacteria
1. Firmicutes (Gram-Positive Bacteria)
1.1. Firmicutes with High GC Content of DNA
1.1.1 Introduction to the Taxonomy of Actinobacteria 297
erko stackebrandt and peter schumann
1.1.2 The Family Bifidobacteriaceae 322
bruno biavati and paola mattarelli
1.1.3 The Family Propionibacteriaceae: The Genera Friedmanniella,
Luteococcus, Microlunatus, Micropruina, Propioniferax,
Propionimicrobium and Tessarococcus 383
erko stackebrandt and klaus schaal
1.1.4 Family Propionibacteriaceae: The Genus Propionibacterium 400
erko stackebrandt, cecil s. cummins and john l. johnson
1.1.5 The Family Succinivibrionaceae 419
erko stackebrandt and robert hespell
1.1.6 The Family Actinomycetaceae: The Genera Actinomyces, Actinobaculum,
Arcanobacterium, Varibaculum and Mobiluncus 430
klaus p. schaal, atteyet f. yassin and erko stackebrandt
1.1.7 The Family Streptomycetaceae, Part I: Taxonomy 538
peter k鋗pfer
1.1.8 The Family Streptomycetaceae, Part II: Molecular Biology 605
hildgund schrempf
1.1.9 The Genus Actinoplanes and Related Genera 623
gernot vobis
1.1.10 The Family Actinosynnemataceae 654
david p. labeda
1.1.11 The Families Frankiaceae, Geodermatophilaceae, Acidothermaceae
and Sporichthyaceae 669
philippe normand
xii Contents
1.1.12 The Family Thermomonosporaceae: Actinocorallia, Actinomadura,
Spirillospora and Thermomonospora 682
reiner michael kroppenstedt and michael goodfellow
1.1.13 The Family Streptosorangiaceae 725
michael goodfellow and erika teresa quintana
1.1.14 The Family Nocardiopsaceae 754
reiner michael kroppenstedt and lyudmila i. evtushenko
1.1.15 Corynebacterium—Nonmedical 796
wolfgang liebl
1.1.16 The Genus Corynebacterium—Medical 819
alexander von graevenitz and kathryn bernard
1.1.17 The Families Dietziaceae, Gordoniaceae, Nocardiaceae
and Tsukamurellaceae 843
michael goodfellow and luis angel maldonado
1.1.18 The Genus Mycobacterium—Nonmedical 889
sybe hartmans, jan a. m. de bont and erko stackebrandt
1.1.19 The Genus Mycobacterium—Medical 919
beatrice saviola and william bishai
1.1.20 Mycobacterium leprae 934
thomas m. shinnick
1.1.21 The Genus Arthrobacter 945
dorothy jones and r. m. keddie
1.1.22 The Genus Micrococcus 961
miloslav kocur, wesley e. kloos and karl-heinz schleifer
1.1.23 Renibacterium 972
hans-jürgen busse
1.1.24 The Genus Stomatococcus: Rothia mucilaginosa, basonym
Stomatococcus mucilaginosus 975
erko stackebrandt
1.1.25 The Family Cellulomonadaceae 983
erko stackebrandt, peter schumann and helmut prauser
1.1.26 The Family Dermatophilaceae 1002
erko stackebrandt
1.1.27 The Genus Brevibacterium 1013
matthew d. collins
1.1.28 The Family Microbacteriaceae 1020
lyudmila i. evtushenko and mariko takeuchi
Contents xiii
1.1.29 The Genus Nocardioides 1099
jung-hoon yoon and yong-ha park
Index 1115 Volume 4
1. Firmicutes (Gram-Positive Bacteria)
1.2 Firmicutes with Low GC Content of DNA
1.2.1 The Genera Staphylococcus and Macrococcus 5
friedrich g鰐z, tammy bannerman and karl-heinz schleifer
1.2.2 The Genus Streptococcus—Oral 76
jeremy m. hardie and robert a. whiley
1.2.3 Medically Important Beta-Hemolytic Streptococci 108
patrick cleary and qi cheng
1.2.4 Streptococcus pneumoniae 149
elaine tuomanen
1.2.5 The Genus Enterococcus: Taxonomy 163
luc devriese, margo baele and patrick butaye
1.2.6 The Genus Enterococcus: Medical Importance 175
donald j. leblanc
1.2.7 The Genus Lactococcus 205
michael teuber and arnold geis
1.2.8 The Genera Pediococcus and Tetragenococcus 229
wilhelm h. holzapfel, charles m. a. p. franz, wolfgang lugwig,
werner back and leon m. t. dicks
1.2.9 Genera Leuconostoc, Oenococcus and Weissella 267
johanna bj鰎kroth and wilhelm holzapfel
1.2.10 The Genera Lactobacillus and Carnobacterium 319
walter p. hammes and christian hertel
1.2.11 Listeria monocytogenes and the Genus Listeria 403
nadia khelef, marc lecuit, carmen buchrieser, didier cabanes,
olivier dussurget and pascale cossart
1.2.12 The Genus Brochothrix 473
erko stackebrandt and dorothy jones
1.2.13 The Genus Erysipelothrix 488
erko stackebrandt, annette c. reboli and w. edmund farrar
xiv Contents
1.2.14 The Genus Gemella 507
matthew d. collins
1.2.15 The Genus Kurthia 515
erko stackebrandt, ronald m. keddie and dorothy jones
1.2.16 The Genus Bacillus—Nonmedical 526
ralph a. slepecky and h. ernest hemphill
1.2.17 The Genus Bacillus—Insect Pathogens 559
donald p. stahly, robert e. andrews and allan a. yousten
1.2.18 The Genus Bacillus—Medical 605
w. edmund farrar and annette c. reboli
1.2.19 Genera Related to the Genus Bacillus—Sporolactobacillus,
Sporosarcina, Planococcus, Filibacter and Caryophanon 627
dieter claus, dagmar fritze and miloslav kocur
1.2.20 An Introduction to the Family Clostridiaceae 650
juergen wiegel, ralph tanner and fred a. rainey
1.2.21 Neurotoxigenic Clostridia 674
cesare montecucco, ornella rossetto and michel r. popoff
1.2.22 The Enterotoxic Clostridia 693
bruce a. mcclane, francisco a. uzai,
mariano e. fernandez miyakawa, david lyerly and
tracy wilkins
1.2.23 Clostridium perfringens and Histotoxic Disease 748
julian i. rood
1.2.24 The Genera Desulfitobacterium and Desulfosporosinus: Taxonomy 766
stefan spring and frank rosenzweig
1.2.25 The Genus Desulfotomaculum 782
friedrich widdel
1.2.26 The Anaerobic Gram-Positive Cocci 790
takayuki ezaki, na li and yoshiaki kawamura
1.2.27 The Order Haloanaerobiales 804
aharon oren
1.2.28 The Genus Eubacterium and Related Genera 818
william g. wade
1.2.29 The Genus Mycoplasma and Related Genera (Class Mollicutes) 831
shmuel razin
1.2.30 The Phytopathogenic Spiroplasmas 897
jacqueline fletcher, ulrich melcher and astri wayadande
Contents xv
1.3 Firmicutes with Atypical Cell Walls
1.3.1 The Family Heliobacteriaceae 943
michael t. madigan
1.3.2 Pectinatus, Megasphaera and Zymophilus 957
auli haikara and ilkka helander
1.3.3 The Genus Selenomonas 974
robert p. hespell, bruce j. paster and floyd e. dewhirst
1.3.4 The Genus Sporomusa 983
john a. breznak
1.3.5 The Family Lachnospiraceae, Including the Genera Butyrivibrio,
Lachnospira and Roseburia 994
michael cotta and robert forster
1.3.6 The Genus Veillonella 1014
paul kolenbrander
1.3.7 Syntrophomonadaceae 1033
martin sobieraj and david r. boone
2. Cyanobacteria
2.1 The Cyanobacteria—Isolation, Purification and Identification 1045
john b. waterbury
2.2 The Cyanobacteria—Ecology, Physiology and Molecular Genetics 1066
yehuda cohen and michael gurevitz
2.3 The Genus Prochlorococcus 1091
anton f. post
Index 1103 Volume 5
3. Proteobacteria
Introduction to the Proteobacteria 3
karel kersters, paul de vos, monique gillis, jean swings,
peter vandamme and erko stackebrandt
3.1. Alpha Subclass
3.1.1 The Phototrophic Alphaproteobacteria 41
johannes f. imhoff
xvi Contents
3.1.2 The Genera Prosthecomicrobium and Ancalomicrobium 65
gary e. oertli, cheryl jenkins, naomi ward, fred rainey,
erko stackebrandt and james t. staley
3.1.3 Dimorphic Prosthecate Bacteria: The Genera Caulobacter,
Asticcacaulis, Hyphomicrobium, Pedomicrobium, Hyphomonas
and Thiodendron 72
jeanne s. poindexter
3.1.4 The Genus Agrobacterium 91
ann g. matthysse
3.1.5 The Genus Azospirillum 115
anton hartmann and jose ivo baldani
3.1.6 The Genus Herbaspirillum 141
michael schmid, jose ivo baldani and anton hartmann
3.1.7 The Genus Beijerinckia 151
jan hendrick becking
3.1.8 The Family Acetobacteraceae: The Genera Acetobacter, Acidomonas,
Asaia, Gluconacetobacter, Gluconobacter, and Kozakia 163
karel kersters, puspita lisdiyanti, kazuo komagata and
jean swings
3.1.9 The Genus Zymomonas 201
hermann sahm, stephanie bringer-meyer and georg a. sprenger
3.1.10 The Manganese-Oxidizing Bacteria 222
kenneth h. nealson
3.1.11 The Genus Paracoccus 232
donovan p. kelly, frederick a. rainey and ann p. wood
3.1.12 The Genus Phenylobacterium 250
jürgen ebersp鋍her and franz lingens
3.1.13 Methylobacterium 257
peter n. green
3.1.14 The Methanotrophs—The Families Methylococcaceae and
Methylocystaceae 266
john bowman
3.1.15 The Genus Xanthobacter 290
juergen wiegel
3.1.16 The Genus Brucella 315
edgardo moreno and ignacio moriyón
3.1.17 Introduction to the Rickettsiales and Other Intracellular Prokaryotes 457
david n. fredricks
3.1.18 The Genus Bartonella 467
michael f. minnick and burt e. anderson
Contents xvii
3.1.19 The Order Rickettsiales 493
xue-jie yu and david h. walker
3.1.20 The Genus Coxiella 529
robert a. heinzen and james e. samuel
3.1.21 The Genus Wolbachia 547
markus riegler and scott l. o’neill
3.1.22 Aerobic Phototrophic Proteobacteria 562
vladimir v. yurkov
3.1.23 The Genus Seliberia 585
jean m. schmidt and james r. swafford
3.2. Beta Subclass
3.2.1 The Phototrophic Betaproteobacteria 593
johannes f. imhoff
3.2.2 The Neisseria 602
daniel c. stein
3.2.3 The Genus Bordetella 648
alison weiss
3.2.4 Achromobacter, Alcaligenes and Related Genera 675
hans-jürgen busse and andreas stolz
3.2.5 The Genus Spirillum 701
noel r. krieg
3.2.6 The Genus Aquaspirillum 710
bruno pot, monique gillis and jozef de ley
3.2.7 Comamonas 723
anne willems and paul de vos
3.2.8 The Genera Chromobacterium and Janthinobacterium 737
monique gillis and jozef de ley
3.2.9 The Genera Phyllobacterium and Ochrobactrum 747
jean swings, bart lambert, karel kersters and barry holmes
3.2.10 The Genus Derxia 751
jan hendrick becking
3.2.11 The Genera Leptothrix and Sphaerotilus 758
stefan spring
3.2.12 The Lithoautotrophic Ammonia-Oxidizing Bacteria 778
hans-peter koops, ulrike purkhold, andreas pommerening-r鰏er,
gabriele timmermann and michael wagner
xviii Contents
3.2.13 The Genus Thiobacillus 814
lesley a. robertson and j. gijs kuenen
3.2.14 The Genera Simonsiella and Alysiella 830
brian p. hedlund and daisy a. kuhn
3.2.15 Eikenella corrodens and Closely Related Bacteria 842
edward j. bottone and paul a. granato
3.2.16 The Genus Burkholderia 850
donald e. woods and pamela a. sokol
3.2.17 The Nitrite-Oxidizing Bacteria 863
aharon abeliovich
3.2.18 The Genera Azoarcus, Azovibrio, Azospira and Azonexus 875
barbara reinhold-hurek and thomas hurek
Index 000 Volume 6
3. Proteobacteria
3.3. Gamma Subclass
3.3.1 New Members of the Family Enterobacteriaceae 5
j. michael janda
3.3.2 Phylogenetic Relationships of Bacteria with Special Reference to
Endosymbionts and Enteric Species 41
m. pilar francino, scott r. santos and howard ochman
3.3.3 The Genus Escherichia 60
rodney a. welch
3.3.4 The Genus Edwardsiella 72
sharon l. abbott and j. michael janda
3.3.5 The Genus Citrobacter 90
diana borenshtein and david b. schauer
3.3.6 The Genus Shigella 99
yves germani and philippe j. sansonetti
3.3.7 The Genus Salmonella 123
craig d. ellermeier and james m. slauch
3.3.8 The Genus Klebsiella 159
sylvain brisse, francine grimont and patrick a. d. grimont
Contents xix
3.3.9 The Genus Enterobacter 197
francine grimont and patrick a. d. grimont
3.3.10 The Genus Hafnia 215
megan e. mcbee and david b. schauer
3.3.11 The Genus Serratia 219
francine grimont and patrick a. d. grimont
3.3.12 The Genera Proteus, Providencia, and Morganella 245
jim manos and robert belas
3.3.13 Y. enterocolitica and Y. pseudotuberculosis 270
elisabeth carniel, ingo autenrieth, guy cornelis,
hiroshi fukushima, francoise guinet, ralph isberg,
jeannette pham, michael prentice, michel simonet,
mikael skurnik and george swauters
3.3.14 Yersinia pestis and Bubonic Plague 399
bob brubaker
3.3.15 Erwinia and Related Genera 443
clarence i. kado
3.3.16 The Genera Photorhabdus and Xenorhabdus 451
noel boemare and raymond akhurst
3.3.17 The Family Vibrionaceae 495
j. j. farmer iii
3.3.18 The Genera Vibrio and Photobacterium 508
j. j. farmer iii and f. w. hickman-brenner
3.3.20 The Genera Aeromonas and Plesiomonas 564
j. j. farmer iii, m. j. arduino and f. w. hickman-brenner
3.3.21 The Genus Alteromonas and Related Proteobacteria 597
valery v. mikhailov, lyudmila a. romanenko and
elena p. ivanova
3.3.22 Nonmedical: Pseudomonas 646
edward r. b. moore, brian j. tindall, vitor a. p. martins dos santos,
dietmar h. pieper, juan-luis ramos and norberto j. palleroni
3.3.23 Pseudomonas aeruginosa 704
timothy l. yahr and matthew r. parsek
3.3.24 Phytopathogenic Pseudomonads and Related
Plant-Associated Pseudomonads 714
milton n. schroth, donald c. hildebrand and
nickolas panopoulos
3.3.25 Xylophilus 741
ann willems and monique gillis
xx Contents
3.3.26 The Genus Acinetobacter 746
kevin towner
3.3.27 The Family Azobacteriaceae 759
jan hendrick becking
3.3.28 The Genera Beggiatoa and Thioploca 784
andreas teske and douglas c. nelson
3.3.29 The Family Halomonadaceae 811
david r. arahal and antonio ventosa
3.3.30 The Genus Deleya 836
karel kersters
3.3.31 The Genus Frateuria 844
jean swings
3.3.32 The Chromatiaceae 846
johannes f. imhoff
3.3.33 The Family Ectothiorhodospiraceae 874
johannes f. imhoff
3.3.34 Oceanospirillum and Related Genera 887
josé m. gonzález and william b. whitman
3.3.35 Serpens flexibilis: An Unusually Flexible Bacterium 916
robert b. hespell
3.3.36 The Genus Psychrobacter 920
john p. bowman
3.3.37 The Genus Leucothrix 931
thomas d. brock
3.3.38 The Genus Lysobacter 939
hans reichenbach
3.3.39 The Genus Moraxella 958
john p. hays
3.3.40 Legionella Species and Legionnaire’s Disease 988
paul h. edelstein and nicholas p. cianciotto
3.3.41 The Genus Haemophilus 1034
doran l. fink and joseph w. st. geme, iii
3.3.42 The Genus Pasteurella 1062
henrik christensen and magne bisgaard
3.3.43 The Genus Cardiobacterium 1091
sydney m. harvey and james r. greenwood
Contents xxi
3.3.44 The Genus Actinobacillus 1094
janet i. macinnes and edward t. lally
3.3.45 The Genus Francisella 1119
francis nano and karen elkins
3.3.46 Ecophysiology of the Genus Shewanella 1133
kenneth h. nealson and james scott
3.3.47 The Genus Nevskia 1152
heribert cypionka, hans-dietrich babenzien,
frank oliver glockner and rudolf amann
3.3.48 The Genus Thiomargarita 1156
schulz
Index 1164 Volume 7
3. Proteobacteria
3.4. Delta Subclass
3.4.1 The Genus Pelobacter 5
bernhard schink
3.4.2 The Genus Bdellovibrio 12
edouard jurkevitch
3.4.3 The Myxobacteria 31
lawrence j. shimkets, martin dworkin and hans reichenbach
3.5. Epsilon Subclass
3.5.1 The Genus Campylobacter 119
trudy m. wassenaar and diane g. newell
3.5.2 The Genus Helicobacter 139
jay v. solnick, jani l. o’rourke, peter van damme and adrian lee
3.5.3 The Genus Wolinella 178
j鰎g simon, roland gross, oliver klimmek and achim kr鰃er
4. Spirochetes
4.1 Free-Living Saccharolytic Spirochetes: The Genus Spirochaeta 195
susan leschine, bruce j. paster and ercole canale-parola
xxii Contents
4.2 The Genus Treponema 211
steven j. norris, bruce j. paster, annette moter and
ulf b. g鯾el
4.3 The Genus Borrelia 235
melissa caimano
4.4 The Genus Leptospira 294
ben adler and solly faine
4.5 Termite Gut Spirochetes 318
john a. breznak and jared r. leadbetter
4.6 The Genus Brachyspira 330
thaddeus b. stanton
5. Chlorobiaceae
5.1 The Family Chlorobiaceae 359
j鰎g overmann
6. Bacteroides and Cytophaga Group
6.1 The Medically Important Bacteroides spp. in Health and Disease 381
c. jeffrey smith, edson r. rocha and bruce j. paster
6.2 The Genus Porphyromonas 428
frank c. gibson and caroline attardo genco
6.3 An Introduction to the Family Flavobacteriaceae 455
jean-fran鏾is bernardet and yasuyoshi nakagawa
6.4 The Genus Flavobacterium 481
jean-fran鏾is bernardet and john bowman
6.5 The Genera Bergeyella and Weeksella 532
celia j. hugo, brita bruun and piet j. jooste
6.6 The Genera Flavobacterium, Sphingobacterium and Weeksella 539
barry holmes
6.7 The Order Cytophagales 549
hans reichenbach
6.8 The Genus Saprospira 591
hans reichenbach
6.9 The Genus Haliscomenobacter 602
eppe gerke mulder and maria h. deinema
6.10 Sphingomonas and Related Genera 605
david l. balkwill, j. k. fredrickson and m. f. romine
Contents xxiii
xxiv Contents
6.11 The Genera Empedobacter and Myroides 630
celia j. hugo, brita bruun and piet j. jooste
6.12 The Genera Chryseobacterium and Elizabethkingia 638
jean-fran鏾is bernardet, celia hugo and brita bruun
6.13 The Marine Clade of the Family Flavobacteriaceae: The Genera
Aequorivita, Arenibacter, Cellulophaga, Croceibacter, Formosa,
Gelidibacter, Gillisia, Maribacter, Mesonia, Muricauda, Polaribacter,
Psychroflexus, Psychroserpens, Robiginitalea, Salegentibacter,
Tenacibaculum, Ulvibacter,Vitellibacter and Zobellia 677
john p. bowman
6.14 Capnophilic Bird Pathogens in the Family Flavobacteriaceae:
Riemerella, Ornithobacterium and Coenonia 695
p. vandamme, h. m. hafez and k. h. hinz
6.15 The Genus Capnocytophaga 709
e. r. leadbetter
6.16 The Genera Rhodothermus, Thermonema, Hymenobacter
and Salinibacter 712
aharon oren
7. Chlamydia
7.1 The Genus Chlamydia—Medical 741
murat v. kalayoglu and gerald i. byrne
8. Planctomyces and Related Bacteria
8.1 The Order Planctomycetales, Including the Genera Planctomyces,
Pirellula, Gemmata and Isosphaera and the Candidatus Genera
Brocadia, Kuenenia and Scalindua 757
naomi ward, james t. staley, john a. fuerst, stephen giovannoni,
heinz schlesner and erko stackebrandt
9. Thermus
9.1 The Genus Thermus and Relatives 797
milton s. da costa, fred a. rainey and m. fernanda nobre
10. Chloroflexaceae and Related Bacteria
10.1 The Family Chloroflexaceae 815
satoshi hanada and beverly k. pierson
10.2 The Genus Thermoleophilum 843
jerome j. perry
10.3 The Genus Thermomicrobium 849
jerome j. perry
10.4 The Genus Herpetosiphon 854
natuschka lee and hans reichenbach
11. Verrucomicrobium
11.1 The Phylum Verrucomicrobia: A Phylogenetically Heterogeneous
Bacterial Group 881
heinz schlesner, cheryl jenkins and james t. staley
12. Thermotogales
12.1 Thermotogales 899
robert huber and michael hannig
13. Aquificales
13.1 Aquificales 925
robert huber and wolfgang eder
14. Phylogenetically Unaffiliated Bacteria
14.1 Morphologically Conspicuous Sulfur-Oxidizing Eubacteria 941
jan w. m. la rivière and karin schmidt
14.2 The Genus Propionigenium 955
bernhard schink
14.3 The Genus Zoogloea 960
patrick r. dugan, daphne l. stoner and harvey m. pickrum
14.4 Large Symbiotic Spirochetes: Clevelandia, Cristispira, Diplocalyx,
Hollandina and Pillotina 971
lynn margulis and gregory hinkle
14.5 Streptobacillus moniliformis 983
james r. greenwood and sydney m. harvey
14.6 The Genus Toxothrix 986
peter hirsch
14.7 The Genus Gallionella 990
hans h. hanert
14.8 The Genera Caulococcus and Kusnezovia 996
jean m. schmidt and georgi a. zavarzin
14.9 The Genus Brachyarcus 998
peter hirsch
Contents xxv
14.10 The Genus Pelosigma 1001
peter hirsch
14.11 The Genus Siderocapsa (and Other Iron- and Maganese-Oxidizing
Eubacteria) 1005
hans h. hanert
14.12 The Genus Fusobacterium 1016
tor hofstad
Index 1029 如有需要 请跟贴说明 一章10鸭币 书很不错，方方面面都讲到了，手头常备一册查询所需内容十分好。
手头只有第一册，请楼主慷慨免费共享！
多谢！ 我是厦门大学的,找这本书很久了,请楼主与兄弟共享,谢谢了 我需要这部分:1.1.7 The Family Streptomycetaceae, Part I: Taxonomy 538
peter k鋗pfer,请楼主慷慨共享,谢谢了
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